Vanadium in PDB 8vjq: Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera

All present enzymatic activity of Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera:
1.11.1.18;

The structure of Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera also contains other interesting chemical elements:

Bromine	(Br)	2 atoms
Calcium	(Ca)	2 atoms

The binding sites of Vanadium atom in the Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera (pdb code 8vjq). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total 2 binding sites of Vanadium where determined in the Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera, PDB code: 8vjq:
Jump to Vanadium binding site number: 1; 2;

Vanadium binding site 1 out of 2 in the Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera within 5.0Å range: probe atom residue distance (Å) B Occ A:V603 b:65.6 occ:1.00 V A:VO4603 0.0 65.6 1.0 O1 A:VO4603 1.6 40.1 1.0 O2 A:VO4603 1.6 49.9 1.0 O3 A:VO4603 1.6 53.6 1.0 NE2 A:HIS553 1.9 17.6 1.0 CD2 A:HIS553 2.8 16.3 1.0 CE1 A:HIS553 3.0 16.9 1.0 NH2 A:ARG547 3.4 12.0 1.0 NE A:ARG547 3.7 17.7 1.0 NH2 A:ARG408 3.7 12.6 1.0 CE1 A:HIS480 3.8 17.0 1.0 N A:GLY486 3.8 15.1 1.0 CG A:HIS553 3.9 7.8 1.0 CZ A:ARG547 4.0 16.7 1.0 ND1 A:HIS553 4.0 14.9 1.0 NH1 A:ARG408 4.1 15.1 1.0 OG A:SER485 4.1 21.4 1.0 O A:HOH702 4.2 30.0 1.0 N A:HIS487 4.2 47.8 1.0 NZ A:LYS400 4.3 15.5 1.0 CZ A:ARG408 4.4 8.1 1.0 CA A:SER485 4.5 11.2 1.0 CA A:GLY486 4.6 13.4 1.0 ND1 A:HIS480 4.6 15.8 1.0 C A:SER485 4.6 10.8 1.0 CG A:PRO478 4.6 24.6 1.0 CG2 A:VAL552 4.6 13.2 1.0 CB A:SER485 4.7 20.4 1.0 ND1 A:HIS487 4.8 55.0 1.0 CD A:PRO478 4.8 20.2 1.0 NE2 A:HIS480 4.8 17.5 1.0 CD A:ARG547 4.9 18.9 1.0 C A:GLY486 4.9 14.6 1.0 CE A:LYS400 5.0 10.5 1.0

Vanadium binding site 2 out of 2 in the Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 2 of Bromide-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera within 5.0Å range: probe atom residue distance (Å) B Occ B:V603 b:61.5 occ:1.00 V B:VO4603 0.0 61.5 1.0 O1 B:VO4603 1.5 48.1 1.0 O2 B:VO4603 1.6 54.6 1.0 O3 B:VO4603 1.6 57.8 1.0 NE2 B:HIS553 1.9 13.7 1.0 CE1 B:HIS553 2.8 13.4 1.0 CD2 B:HIS553 2.9 15.7 1.0 CE1 B:HIS480 3.5 16.9 1.0 NH2 B:ARG408 3.5 12.2 1.0 N B:GLY486 3.6 17.8 1.0 NH2 B:ARG547 3.7 16.4 1.0 NZ B:LYS400 3.9 12.9 1.0 OG B:SER485 3.9 20.3 1.0 ND1 B:HIS553 3.9 11.2 1.0 CG B:HIS553 4.0 8.4 1.0 NH1 B:ARG408 4.0 14.3 1.0 NE B:ARG547 4.2 15.4 1.0 CA B:SER485 4.2 10.9 1.0 ND1 B:HIS480 4.2 15.5 1.0 N B:HIS487 4.2 50.2 1.0 O B:HOH702 4.2 30.0 1.0 CZ B:ARG408 4.2 8.8 1.0 CZ B:ARG547 4.3 17.9 1.0 C B:SER485 4.3 9.6 1.0 CB B:SER485 4.3 17.8 1.0 CA B:GLY486 4.4 15.8 1.0 CG B:PRO478 4.5 19.9 1.0 NE2 B:HIS480 4.6 18.5 1.0 CE B:LYS400 4.7 9.1 1.0 ND1 B:HIS487 4.8 48.1 1.0 BR B:BR601 4.9 30.0 1.0 C B:GLY486 4.9 15.2 1.0 CG2 B:VAL552 4.9 14.6 1.0

L.Z.Hessefort, D.R.Williams, K.F.Biegasiewicz. High-Resolution Cryoem Unveils Insights Into the Catalytic Mechanism of A Vanadium-Dependent Bromoperoxidase To Be Published.