Atomistry » Vanadium » PDB 1z12-3myh » 2qwm
Atomistry »
  Vanadium »
    PDB 1z12-3myh »
      2qwm »

Vanadium in PDB 2qwm: Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State

Protein crystallography data

The structure of Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State, PDB code: 2qwm was solved by J.Jiang, E.G.Maes, L.Wang, A.B.Taylor, A.P.Hinck, E.M.Lafer, R.Sousa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.06 / 1.86
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 73.336, 77.841, 75.793, 90.00, 101.53, 90.00
R / Rfree (%) 18.8 / 22.4

Other elements in 2qwm:

The structure of Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Sodium (Na) 4 atoms

Vanadium Binding Sites:

The binding sites of Vanadium atom in the Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State (pdb code 2qwm). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total 2 binding sites of Vanadium where determined in the Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State, PDB code: 2qwm:
Jump to Vanadium binding site number: 1; 2;

Vanadium binding site 1 out of 2 in 2qwm

Go back to Vanadium Binding Sites List in 2qwm
Vanadium binding site 1 out of 2 in the Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:V491

b:17.9
occ:1.00
V A:VO4491 0.0 17.9 1.0
O2 A:VO4491 1.9 9.9 1.0
O1 A:VO4491 1.9 12.5 1.0
O3 A:VO4491 1.9 11.8 1.0
O4 A:VO4491 1.9 9.8 1.0
MG A:MG587 3.3 8.3 1.0
OG1 A:THR204 3.5 12.1 1.0
OG1 A:THR13 3.5 11.0 1.0
NZ A:LYS71 3.6 2.5 1.0
NA A:NA590 3.6 9.4 1.0
OE1 A:GLU175 3.7 13.4 1.0
O3B A:ADP486 3.8 11.6 1.0
O A:HOH597 3.8 8.3 1.0
O A:HOH640 3.9 9.9 1.0
N A:THR13 4.0 9.3 1.0
O A:HOH600 4.0 3.4 1.0
CB A:THR13 4.2 9.8 1.0
O A:HOH727 4.2 3.6 1.0
OE2 A:GLU175 4.4 15.6 1.0
CD A:GLU175 4.4 13.2 1.0
CE A:LYS71 4.5 3.9 1.0
PB A:ADP486 4.5 9.7 1.0
O2B A:ADP486 4.6 16.7 1.0
O1B A:ADP486 4.7 10.3 1.0
CA A:GLY12 4.7 10.5 1.0
OD2 A:ASP206 4.7 14.3 1.0
CA A:THR13 4.7 9.9 1.0
CB A:THR204 4.8 10.8 1.0
C A:GLY12 4.9 10.3 1.0
CG2 A:THR204 4.9 9.6 1.0
O A:HOH606 5.0 10.0 1.0
CD A:LYS71 5.0 4.8 1.0

Vanadium binding site 2 out of 2 in 2qwm

Go back to Vanadium Binding Sites List in 2qwm
Vanadium binding site 2 out of 2 in the Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 2 of Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:V491

b:17.3
occ:1.00
V B:VO4491 0.0 17.3 1.0
O3 B:VO4491 1.9 9.1 1.0
O2 B:VO4491 1.9 8.6 1.0
O1 B:VO4491 1.9 10.1 1.0
O4 B:VO4491 1.9 9.0 1.0
MG B:MG687 3.3 7.0 1.0
O B:HOH840 3.3 4.4 1.0
OG1 B:THR13 3.5 10.3 1.0
OG1 B:THR204 3.5 11.2 1.0
NZ B:LYS71 3.6 2.0 1.0
NA B:NA690 3.6 7.9 1.0
OE1 B:GLU175 3.7 13.3 1.0
O B:HOH707 3.8 8.5 1.0
O3B B:ADP486 3.9 11.6 1.0
O B:HOH714 3.9 5.1 1.0
N B:THR13 3.9 9.7 1.0
O B:HOH803 4.0 5.8 1.0
CB B:THR13 4.2 9.7 1.0
O B:HOH712 4.4 2.0 1.0
OE2 B:GLU175 4.4 13.7 1.0
CE B:LYS71 4.4 4.1 1.0
CD B:GLU175 4.4 12.5 1.0
PB B:ADP486 4.5 8.7 1.0
CA B:GLY12 4.6 11.0 1.0
O2B B:ADP486 4.7 14.4 1.0
O1B B:ADP486 4.7 8.2 1.0
CA B:THR13 4.7 9.7 1.0
OD2 B:ASP206 4.7 14.5 1.0
CB B:THR204 4.8 10.1 1.0
C B:GLY12 4.8 10.4 1.0
CD B:LYS71 4.9 5.0 1.0
O B:HOH702 4.9 6.5 1.0

Reference:

J.Jiang, E.G.Maes, A.B.Taylor, L.Wang, A.P.Hinck, E.M.Lafer, R.Sousa. Structural Basis of J Cochaperone Binding and Regulation of HSP70. Mol.Cell V. 28 422 2007.
ISSN: ISSN 1097-2765
PubMed: 17996706
DOI: 10.1016/J.MOLCEL.2007.08.022
Page generated: Tue Aug 19 07:16:27 2025

Last articles

Mn in 9LJU
Mn in 9LJW
Mn in 9LJS
Mn in 9LJR
Mn in 9LJT
Mn in 9LJV
Mg in 9UA2
Mg in 9R96
Mg in 9VM1
Mg in 9P01
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy