Vanadium in PDB 8t1p: BMRCD_OC-Adpvi

The structure of BMRCD_OC-Adpvi also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Vanadium atom in the BMRCD_OC-Adpvi (pdb code 8t1p). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total only one binding site of Vanadium was determined in the BMRCD_OC-Adpvi, PDB code: 8t1p:

Vanadium binding site 1 out of 1 in the BMRCD_OC-Adpvi


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of BMRCD_OC-Adpvi within 5.0Å range: probe atom residue distance (Å) B Occ D:V701 b:65.1 occ:1.00 VG D:AOV701 0.0 65.1 1.0 O1G D:AOV701 1.5 36.2 1.0 O3G D:AOV701 1.8 46.8 1.0 O2G D:AOV701 1.8 49.1 1.0 O4G D:AOV701 1.8 43.0 1.0 O3B D:AOV701 1.8 49.3 1.0 HB2 C:SER476 2.9 26.9 1.0 PB D:AOV701 3.0 42.1 1.0 HZ1 D:LYS469 3.1 24.9 1.0 H C:GLY478 3.3 35.7 1.0 HE22 D:GLN511 3.3 25.6 1.0 O2B D:AOV701 3.4 50.0 1.0 O1B D:AOV701 3.5 58.2 1.0 MG D:MG702 3.5 28.7 1.0 H C:GLY477 3.6 40.1 1.0 HA D:THR465 3.7 12.4 1.0 OE2 D:GLU592 3.8 40.1 1.0 NE2 D:HIS623 3.9 28.2 1.0 O D:THR465 3.9 20.1 1.0 HG23 D:THR465 3.9 23.1 1.0 CB C:SER476 3.9 26.9 1.0 HZ3 D:LYS469 3.9 24.9 1.0 NZ D:LYS469 4.0 24.9 1.0 N C:GLY478 4.0 35.7 1.0 HG22 D:THR465 4.1 23.1 1.0 N C:GLY477 4.1 40.1 1.0 HG C:SER476 4.1 26.9 1.0 HB1 C:ALA504 4.2 31.4 1.0 NE2 D:GLN511 4.3 25.6 1.0 OG C:SER476 4.3 38.5 1.0 C D:THR465 4.4 17.7 1.0 HA3 C:GLY478 4.4 30.4 1.0 HE2 D:LYS469 4.4 18.1 1.0 HB3 C:SER476 4.4 26.9 1.0 CA D:THR465 4.5 12.4 1.0 O3A D:AOV701 4.5 30.5 1.0 CG2 D:THR465 4.5 23.1 1.0 HA3 C:GLY477 4.5 38.8 1.0 HD2 D:HIS623 4.7 27.5 1.0 HE21 D:GLN511 4.7 25.6 1.0 CA C:GLY477 4.7 38.8 1.0 CD2 D:HIS623 4.7 27.5 1.0 CE D:LYS469 4.8 18.1 1.0 HZ2 D:LYS469 4.8 24.9 1.0 CA C:GLY478 4.8 30.4 1.0 CE1 D:HIS623 4.8 28.6 1.0 C C:SER476 4.8 29.5 1.0 CA C:SER476 4.8 25.5 1.0 C C:GLY477 4.9 39.3 1.0 HA C:SER476 4.9 25.5 1.0 HE1 D:HIS623 4.9 28.6 1.0 CD D:GLU592 4.9 31.8 1.0

Q.Tang, M.Sinclair, H.S.Hasdemir, R.A.Stein, E.Karakas, E.Tajkhorshid, H.S.Mchaourab. Asymmetric Conformations and Lipid Interactions Shape the Atp-Coupled Cycle of A Heterodimeric Abc Transporter. Nat Commun V. 14 7184 2023.
ISSN: ESSN 2041-1723
PubMed: 37938578
DOI: 10.1038/S41467-023-42937-5