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Vanadium in PDB 7ou0: The Structure of Muts Bound to Two Molecules of Adp-Vanadate

Other elements in 7ou0:

The structure of The Structure of Muts Bound to Two Molecules of Adp-Vanadate also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Vanadium Binding Sites:

The binding sites of Vanadium atom in the The Structure of Muts Bound to Two Molecules of Adp-Vanadate (pdb code 7ou0). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total 2 binding sites of Vanadium where determined in the The Structure of Muts Bound to Two Molecules of Adp-Vanadate, PDB code: 7ou0:
Jump to Vanadium binding site number: 1; 2;

Vanadium binding site 1 out of 2 in 7ou0

Go back to Vanadium Binding Sites List in 7ou0
Vanadium binding site 1 out of 2 in the The Structure of Muts Bound to Two Molecules of Adp-Vanadate


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of The Structure of Muts Bound to Two Molecules of Adp-Vanadate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:V901

b:22.7
occ:1.00
V A:VO4901 0.0 22.7 1.0
O4 A:VO4901 1.9 47.0 1.0
O1 A:VO4901 1.9 19.5 1.0
O2 A:VO4901 1.9 18.5 1.0
O3 A:VO4901 1.9 24.7 1.0
O1B B:ADP1002 2.9 37.7 1.0
PB B:ADP1002 3.6 37.7 1.0
ND2 B:ASN616 3.7 33.7 1.0
O3B B:ADP1002 3.7 37.7 1.0
O2B B:ADP1002 3.8 37.7 1.0
CE1 B:HIS728 3.9 60.9 1.0
MG B:MG1001 3.9 26.8 1.0
O A:GLY698 4.2 63.1 1.0
N A:PHE670 4.3 54.6 1.0
NZ B:LYS620 4.4 28.2 1.0
N B:MET617 4.5 38.5 1.0
CB A:PHE670 4.5 49.7 1.0
CA B:ASN616 4.5 35.6 1.0
NE2 B:HIS728 4.5 62.0 1.0
CB A:SER668 4.5 67.1 1.0
N A:THR669 4.6 67.1 1.0
CG B:ASN616 4.6 33.9 1.0
OG A:SER668 4.6 63.0 1.0
CB B:ASN616 4.6 33.8 1.0
CB A:THR669 4.8 62.5 1.0
ND1 B:HIS728 5.0 59.3 1.0

Vanadium binding site 2 out of 2 in 7ou0

Go back to Vanadium Binding Sites List in 7ou0
Vanadium binding site 2 out of 2 in the The Structure of Muts Bound to Two Molecules of Adp-Vanadate


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 2 of The Structure of Muts Bound to Two Molecules of Adp-Vanadate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:V904

b:22.7
occ:1.00
V A:VO4904 0.0 22.7 1.0
O3 A:VO4904 1.9 24.7 1.0
O4 A:VO4904 1.9 47.0 1.0
O1 A:VO4904 1.9 19.5 1.0
O2 A:VO4904 1.9 18.5 1.0
O2B A:ADP903 2.7 47.0 1.0
ND2 A:ASN616 3.0 39.6 1.0
PB A:ADP903 3.3 47.0 1.0
O3B A:ADP903 3.4 47.0 1.0
O1B A:ADP903 3.6 47.0 1.0
MG A:MG902 3.9 13.6 1.0
NE2 A:HIS728 3.9 51.3 1.0
OG B:SER668 4.1 54.0 1.0
CG A:ASN616 4.2 38.7 1.0
NZ A:LYS620 4.2 26.3 1.0
CG2 B:THR669 4.2 49.3 1.0
N A:MET617 4.3 45.5 1.0
CB B:SER668 4.4 56.0 1.0
CA A:ASN616 4.4 41.1 1.0
N B:PHE670 4.6 41.1 1.0
CB A:ASN616 4.6 39.4 1.0
CB B:PHE670 4.6 37.6 1.0
CE1 A:HIS728 4.7 51.9 1.0
CD2 A:HIS728 4.8 51.1 1.0
O3A A:ADP903 4.8 47.0 1.0
CE A:LYS620 4.8 26.9 1.0
N B:THR669 4.8 47.5 1.0
C A:ASN616 4.9 43.7 1.0

Reference:

A.Borsellini, V.Kunetsky, P.Friedhoff, M.H.Lamers. Cryogenic Electron Microscopy Structures Reveal How Atp and Dna Binding in Muts Coordinates Sequential Steps of Dna Mismatch Repair. Nat.Struct.Mol.Biol. V. 29 59 2022.
ISSN: ESSN 1545-9985
PubMed: 35013597
DOI: 10.1038/S41594-021-00707-1
Page generated: Fri Apr 7 20:17:33 2023

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