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Vanadium in PDB 7ch8: Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V

Other elements in 7ch8:

The structure of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Vanadium Binding Sites:

The binding sites of Vanadium atom in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V (pdb code 7ch8). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total 2 binding sites of Vanadium where determined in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V, PDB code: 7ch8:
Jump to Vanadium binding site number: 1; 2;

Vanadium binding site 1 out of 2 in 7ch8

Go back to Vanadium Binding Sites List in 7ch8
Vanadium binding site 1 out of 2 in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V within 5.0Å range:
probe atom residue distance (Å) B Occ
I:V301

b:79.1
occ:1.00
VG I:AD9301 0.0 79.1 1.0
O2G I:AD9301 1.5 79.1 1.0
O3G I:AD9301 1.5 79.1 1.0
O1G I:AD9301 1.5 79.1 1.0
O3B I:AD9301 1.6 79.1 1.0
MG I:MG302 2.6 88.0 1.0
PB I:AD9301 2.8 79.1 1.0
O2B I:AD9301 3.1 79.1 1.0
O3A I:AD9301 3.4 79.1 1.0
CE I:LYS47 4.0 66.5 1.0
O1B I:AD9301 4.0 79.1 1.0
OG1 I:THR48 4.1 63.5 1.0
CE1 I:HIS203 4.2 64.2 1.0
O I:SER43 4.3 69.5 1.0
NZ I:LYS47 4.5 66.5 1.0
CB I:THR48 4.7 63.5 1.0
CA I:SER43 4.7 69.5 1.0
NE2 I:HIS203 4.9 64.2 1.0
PA I:AD9301 5.0 79.1 1.0

Vanadium binding site 2 out of 2 in 7ch8

Go back to Vanadium Binding Sites List in 7ch8
Vanadium binding site 2 out of 2 in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 2 of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V within 5.0Å range:
probe atom residue distance (Å) B Occ
J:V301

b:76.5
occ:1.00
VG J:AD9301 0.0 76.5 1.0
O3G J:AD9301 1.5 76.5 1.0
O2G J:AD9301 1.5 76.5 1.0
O1G J:AD9301 1.5 76.5 1.0
O3B J:AD9301 1.6 76.5 1.0
MG J:MG302 2.6 67.8 1.0
PB J:AD9301 2.8 76.5 1.0
O2B J:AD9301 3.0 76.5 1.0
O3A J:AD9301 3.3 76.5 1.0
NZ J:LYS47 3.6 64.1 1.0
O1B J:AD9301 4.0 76.5 1.0
N J:GLY44 4.1 71.1 1.0
CE J:LYS47 4.7 64.1 1.0
CA J:SER43 4.7 66.3 1.0
OG1 J:THR48 4.8 59.5 1.0
CD J:LYS47 4.8 64.1 1.0
C J:SER43 4.8 66.3 1.0
PA J:AD9301 4.9 76.5 1.0
CA J:GLY44 4.9 71.1 1.0
CB J:SER43 4.9 66.3 1.0

Reference:

C.Zhou, H.Shi, M.Zhang, L.Zhou, L.Xiao, S.Feng, W.Im, M.Zhou, X.Zhang, Y.Huang. Structural Insight Into Phospholipid Transport By the Mlafebd Complex From P. Aeruginosa. J.Mol.Biol. V. 433 66986 2021.
ISSN: ESSN 1089-8638
PubMed: 33845086
DOI: 10.1016/J.JMB.2021.166986
Page generated: Fri Nov 5 16:16:16 2021

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