Vanadium in PDB 7bcw: Structure of Msba in Salipro with Adp Vanadate

All present enzymatic activity of Structure of Msba in Salipro with Adp Vanadate:
7.5.2.6;

The structure of Structure of Msba in Salipro with Adp Vanadate also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Vanadium atom in the Structure of Msba in Salipro with Adp Vanadate (pdb code 7bcw). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total 2 binding sites of Vanadium where determined in the Structure of Msba in Salipro with Adp Vanadate, PDB code: 7bcw:
Jump to Vanadium binding site number: 1; 2;

Vanadium binding site 1 out of 2 in the Structure of Msba in Salipro with Adp Vanadate


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of Structure of Msba in Salipro with Adp Vanadate within 5.0Å range: probe atom residue distance (Å) B Occ A:V601 b:49.4 occ:1.00 V A:VO4601 0.0 49.4 1.0 O3 A:VO4601 1.9 49.4 1.0 O1 A:VO4601 1.9 49.4 1.0 O4 A:VO4601 1.9 49.4 1.0 O2 A:VO4601 1.9 49.4 1.0 O1B A:ADP602 2.8 42.9 1.0 NZ A:LYS382 3.4 43.2 1.0 MG A:MG603 3.6 44.5 1.0 NE2 A:HIS537 3.7 49.1 1.0 PB A:ADP602 3.9 42.9 1.0 N B:GLY484 4.0 45.0 1.0 O A:SER378 4.0 47.0 1.0 OE1 A:GLN424 4.1 46.0 1.0 O2B A:ADP602 4.2 42.9 1.0 O B:ALA510 4.2 48.6 1.0 CA A:SER378 4.4 47.0 1.0 C A:SER378 4.4 47.0 1.0 CD2 A:HIS537 4.5 49.1 1.0 CB B:SER482 4.6 44.3 1.0 CA B:GLY484 4.6 45.0 1.0 N B:GLY483 4.6 45.0 1.0 CE A:LYS382 4.7 43.2 1.0 CB A:SER378 4.7 47.0 1.0 CE1 A:HIS537 4.7 49.1 1.0 O3B A:ADP602 4.7 42.9 1.0 OG B:SER482 4.7 44.3 1.0 C B:GLY483 5.0 45.0 1.0 CA B:GLY483 5.0 45.0 1.0

Vanadium binding site 2 out of 2 in the Structure of Msba in Salipro with Adp Vanadate


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 2 of Structure of Msba in Salipro with Adp Vanadate within 5.0Å range: probe atom residue distance (Å) B Occ B:V601 b:48.5 occ:1.00 V B:VO4601 0.0 48.5 1.0 O3 B:VO4601 1.9 48.5 1.0 O2 B:VO4601 1.9 48.5 1.0 O4 B:VO4601 1.9 48.5 1.0 O1 B:VO4601 1.9 48.5 1.0 O2B B:ADP602 2.7 42.2 1.0 OE2 B:GLU506 3.5 47.9 1.0 NE2 B:HIS537 3.5 47.2 1.0 MG B:MG603 3.7 44.8 1.0 PB B:ADP602 3.8 42.2 1.0 O1B B:ADP602 3.9 42.2 1.0 CA B:SER378 4.1 45.0 1.0 CB B:SER378 4.1 45.0 1.0 N A:GLY484 4.1 44.9 1.0 NE2 B:GLN424 4.4 45.6 1.0 CD2 B:HIS537 4.4 47.2 1.0 O A:ALA510 4.5 46.7 1.0 CD B:GLU506 4.5 47.9 1.0 CE1 B:HIS537 4.5 47.2 1.0 CA A:GLY484 4.6 44.9 1.0 OE1 B:GLU506 4.6 47.9 1.0 CB A:SER482 4.7 43.9 1.0 O3A B:ADP602 4.7 42.2 1.0 N B:GLY379 4.8 45.6 1.0 OG A:SER482 4.8 43.9 1.0 C B:SER378 4.8 45.0 1.0 N A:GLY483 4.8 45.5 1.0 OE1 B:GLN424 4.9 45.6 1.0 CD B:LYS382 5.0 42.0 1.0

D.M.Kehlenbeck, D.A.K.Traore, I.Josts, S.Sander, M.Moulin, M.Haertlein, S.Prevost, V.T.Forsyth, H.Tidow. Cryo-Em Structure of Msba in Saposin-Lipid Nanoparticles (Salipro) Provides Insights Into Nucleotide Coordination. Febs J. V. 289 2959 2022.
ISSN: ISSN 1742-464X
PubMed: 34921499
DOI: 10.1111/FEBS.16327