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Vanadium in PDB 6z2s: Crystal Structure of Adhibin Analogue-Bound Myosin-2

Protein crystallography data

The structure of Crystal Structure of Adhibin Analogue-Bound Myosin-2, PDB code: 6z2s was solved by W.Ewert, H.-J.Knoelker, G.Tsiavaliaris, M.Preller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.47 / 3.20
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 90.931, 144.22, 156.937, 90, 90, 90
R / Rfree (%) 21.8 / 26.2

Other elements in 6z2s:

The structure of Crystal Structure of Adhibin Analogue-Bound Myosin-2 also contains other interesting chemical elements:

Bromine (Br) 2 atoms
Magnesium (Mg) 1 atom

Vanadium Binding Sites:

The binding sites of Vanadium atom in the Crystal Structure of Adhibin Analogue-Bound Myosin-2 (pdb code 6z2s). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total only one binding site of Vanadium was determined in the Crystal Structure of Adhibin Analogue-Bound Myosin-2, PDB code: 6z2s:

Vanadium binding site 1 out of 1 in 6z2s

Go back to Vanadium Binding Sites List in 6z2s
Vanadium binding site 1 out of 1 in the Crystal Structure of Adhibin Analogue-Bound Myosin-2


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of Crystal Structure of Adhibin Analogue-Bound Myosin-2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:V803

b:46.9
occ:1.00
VG A:AD9803 0.0 46.9 1.0
O3G A:AD9803 1.9 53.6 1.0
O1G A:AD9803 1.9 57.7 1.0
O2G A:AD9803 2.0 53.9 1.0
O3B A:AD9803 2.0 65.5 1.0
H3G1 A:AD9803 2.2 64.4 1.0
H2G1 A:AD9803 2.4 64.7 1.0
O A:HOH901 2.5 60.5 1.0
H A:GLY182 2.7 87.0 1.0
HD22 A:ASN233 2.9 63.7 1.0
HG A:SER236 2.9 75.2 1.0
PB A:AD9803 3.2 62.6 1.0
H A:SER237 3.2 73.4 1.0
HA A:SER181 3.3 71.7 1.0
O2B A:AD9803 3.4 65.0 1.0
HA A:SER236 3.4 67.2 1.0
H A:GLY457 3.5 83.5 1.0
N A:GLY182 3.6 72.5 1.0
HE2 A:LYS185 3.7 75.4 1.0
ND2 A:ASN233 3.7 53.0 1.0
MG A:MG801 3.7 57.0 1.0
OG A:SER236 3.8 62.7 1.0
HD21 A:ASN233 3.9 63.7 1.0
HB2 A:SER181 3.9 81.9 1.0
N A:SER237 4.0 61.2 1.0
O3A A:AD9803 4.0 60.1 1.0
HA A:SER456 4.1 68.2 1.0
HZ1 A:LYS185 4.1 78.1 1.0
CA A:SER181 4.1 59.7 1.0
HA2 A:GLY182 4.2 73.7 1.0
CA A:SER236 4.2 56.0 1.0
O1B A:AD9803 4.3 54.1 1.0
N A:GLY457 4.3 69.6 1.0
HB2 A:SER237 4.3 58.0 1.0
C A:SER181 4.4 71.9 1.0
CE A:LYS185 4.4 62.8 1.0
HE3 A:LYS185 4.4 75.4 1.0
CB A:SER236 4.4 55.5 1.0
O A:HOH902 4.4 60.8 1.0
HA3 A:GLY457 4.5 67.0 1.0
HB2 A:SER236 4.5 66.6 1.0
CA A:GLY182 4.5 61.4 1.0
CB A:SER181 4.5 68.2 1.0
HB3 A:ASN233 4.5 51.5 1.0
C A:SER236 4.6 58.6 1.0
NZ A:LYS185 4.7 65.1 1.0
O A:SER237 4.7 61.1 1.0
HB2 A:ASN233 4.7 51.5 1.0
HB3 A:SER181 4.8 81.9 1.0
CG A:ASN233 4.8 49.0 1.0
O A:HOH905 4.8 55.9 1.0
CB A:ASN233 4.9 42.9 1.0
CA A:SER237 4.9 55.0 1.0
CA A:GLY457 4.9 55.8 1.0
H A:ALA183 5.0 76.7 1.0
CA A:SER456 5.0 56.9 1.0
CB A:SER237 5.0 48.3 1.0

Reference:

A.Bader, W.Ewert, H.-J.Knoelker, M.Preller, G.Tsiavaliaris. The Synthetic Carbazole Adhibin Acts As Selective Myosin Class-IX Inhibitor in Lung Cancer Cells To Be Published.
Page generated: Mon Jul 12 16:14:08 2021

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