Atomistry » Vanadium » PDB 3omx-4zg4 » 3qvf
Atomistry »
  Vanadium »
    PDB 3omx-4zg4 »
      3qvf »

Vanadium in PDB 3qvf: Crystal Structure of Fosfomycin Resistance Kinase Foma From Streptomyces Wedmorensis Complexed with Mgadp and Fosfomycin Vanadate

Protein crystallography data

The structure of Crystal Structure of Fosfomycin Resistance Kinase Foma From Streptomyces Wedmorensis Complexed with Mgadp and Fosfomycin Vanadate, PDB code: 3qvf was solved by S.Pakhomova, S.G.Bartlett, P.A.Doerner, M.E.Newcomer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.32 / 1.85
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 87.380, 87.380, 79.000, 90.00, 90.00, 120.00
R / Rfree (%) 16.4 / 21.9

Other elements in 3qvf:

The structure of Crystal Structure of Fosfomycin Resistance Kinase Foma From Streptomyces Wedmorensis Complexed with Mgadp and Fosfomycin Vanadate also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Vanadium Binding Sites:

The binding sites of Vanadium atom in the Crystal Structure of Fosfomycin Resistance Kinase Foma From Streptomyces Wedmorensis Complexed with Mgadp and Fosfomycin Vanadate (pdb code 3qvf). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total only one binding site of Vanadium was determined in the Crystal Structure of Fosfomycin Resistance Kinase Foma From Streptomyces Wedmorensis Complexed with Mgadp and Fosfomycin Vanadate, PDB code: 3qvf:

Vanadium binding site 1 out of 1 in 3qvf

Go back to Vanadium Binding Sites List in 3qvf
Vanadium binding site 1 out of 1 in the Crystal Structure of Fosfomycin Resistance Kinase Foma From Streptomyces Wedmorensis Complexed with Mgadp and Fosfomycin Vanadate


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of Crystal Structure of Fosfomycin Resistance Kinase Foma From Streptomyces Wedmorensis Complexed with Mgadp and Fosfomycin Vanadate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:V4001

b:66.0
occ:1.00
V A:FV14001 0.0 66.0 1.0
O2 A:FV14001 1.9 38.9 1.0
O1 A:FV14001 1.9 39.3 1.0
O2P A:FV14001 1.9 34.2 1.0
O3 A:FV14001 2.0 47.6 1.0
O A:HOH357 3.1 26.4 1.0
NE2 A:HIS58 3.2 49.6 1.0
P A:FV14001 3.3 34.5 1.0
NZ A:LYS18 3.4 64.8 1.0
O1B A:ADP1260 3.6 43.6 1.0
MG A:MG5000 3.6 43.4 1.0
O3P A:FV14001 3.6 31.9 1.0
O3B A:ADP1260 3.8 48.1 1.0
CD2 A:HIS58 3.9 48.1 1.0
N A:GLY12 3.9 35.9 1.0
N A:GLY53 4.0 34.6 1.0
CE A:LYS18 4.1 68.3 1.0
C1 A:FV14001 4.2 34.9 1.0
CA A:GLY52 4.2 32.8 1.0
CE1 A:HIS58 4.3 49.0 1.0
O1P A:FV14001 4.3 31.5 1.0
PB A:ADP1260 4.3 44.9 1.0
CA A:GLY12 4.4 37.1 1.0
O A:HOH375 4.5 30.4 1.0
N A:GLY54 4.5 38.1 1.0
NZ A:LYS9 4.5 35.9 1.0
C A:GLY52 4.6 33.4 1.0
OG A:SER149 4.8 30.8 1.0
CA A:GLY53 4.9 35.5 1.0
OG1 A:THR210 4.9 42.4 1.0
O2A A:ADP1260 5.0 44.6 1.0
O A:HOH399 5.0 37.0 1.0

Reference:

S.Pakhomova, S.G.Bartlett, P.A.Doerner, M.E.Newcomer. Structural and Biochemical Insights Into the Mechanism of Fosfomycin Phosphorylation By Fosfomycin Resistance Kinase Foma. Biochemistry V. 50 6909 2011.
ISSN: ISSN 0006-2960
PubMed: 21728358
DOI: 10.1021/BI2004334
Page generated: Thu Oct 29 07:05:14 2020

Last articles

Xe in 6AYK
Xe in 6QII
Xe in 6ASM
Xe in 5NSW
Xe in 6FY9
Xe in 5O1K
Xe in 5O27
Xe in 5M69
Xe in 5KPU
Xe in 5I63
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy