Atomistry » Vanadium » PDB 1z12-3myh » 3mjx
Atomistry »
  Vanadium »
    PDB 1z12-3myh »
      3mjx »

Vanadium in PDB 3mjx: Crystal Structure of Myosin-2 Motor Domain in Complex with Adp- Metavanadate and Blebbistatin

Protein crystallography data

The structure of Crystal Structure of Myosin-2 Motor Domain in Complex with Adp- Metavanadate and Blebbistatin, PDB code: 3mjx was solved by R.Fedorov, P.Baruch, S.Bauer, D.J.Manstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.20
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 89.308, 147.026, 154.594, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 22.6

Other elements in 3mjx:

The structure of Crystal Structure of Myosin-2 Motor Domain in Complex with Adp- Metavanadate and Blebbistatin also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Vanadium Binding Sites:

The binding sites of Vanadium atom in the Crystal Structure of Myosin-2 Motor Domain in Complex with Adp- Metavanadate and Blebbistatin (pdb code 3mjx). This binding sites where shown within 5.0 Angstroms radius around Vanadium atom.
In total only one binding site of Vanadium was determined in the Crystal Structure of Myosin-2 Motor Domain in Complex with Adp- Metavanadate and Blebbistatin, PDB code: 3mjx:

Vanadium binding site 1 out of 1 in 3mjx

Go back to Vanadium Binding Sites List in 3mjx
Vanadium binding site 1 out of 1 in the Crystal Structure of Myosin-2 Motor Domain in Complex with Adp- Metavanadate and Blebbistatin


Mono view


Stereo pair view

A full contact list of Vanadium with other atoms in the V binding site number 1 of Crystal Structure of Myosin-2 Motor Domain in Complex with Adp- Metavanadate and Blebbistatin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:V900

b:27.8
occ:1.00
VG A:AD9900 0.0 27.8 1.0
O1G A:AD9900 1.6 24.7 1.0
O2G A:AD9900 1.7 36.8 1.0
O3B A:AD9900 1.8 48.9 1.0
O3G A:AD9900 1.8 21.9 1.0
O A:HOH1310 2.4 20.9 1.0
MG A:MG901 3.2 26.0 1.0
PB A:AD9900 3.3 24.8 1.0
OG A:SER236 3.8 24.9 1.0
N A:SER237 3.8 19.1 1.0
N A:GLY182 3.9 25.1 1.0
ND2 A:ASN233 3.9 24.1 1.0
O A:HOH1156 3.9 23.6 1.0
OG A:SER181 4.0 21.7 1.0
O1B A:AD9900 4.0 22.9 1.0
CA A:SER181 4.0 18.6 1.0
O2B A:AD9900 4.0 27.6 1.0
NZ A:LYS185 4.1 22.2 1.0
N A:GLY457 4.1 21.1 1.0
O A:HOH1143 4.2 21.7 1.0
CA A:SER236 4.2 19.0 1.0
O3A A:AD9900 4.3 30.0 1.0
CB A:SER181 4.4 18.9 1.0
O A:HOH1171 4.4 25.8 1.0
O A:SER237 4.4 25.1 1.0
CB A:SER236 4.4 15.6 1.0
C A:SER181 4.5 21.0 1.0
C A:SER236 4.5 21.7 1.0
OG A:SER237 4.5 30.0 1.0
CB A:SER237 4.6 26.3 1.0
CE A:LYS185 4.7 24.7 1.0
CA A:SER237 4.8 19.4 1.0
CA A:SER456 4.8 25.3 1.0
CA A:GLY457 4.8 13.5 1.0
CA A:GLY182 4.9 20.8 1.0
CG A:ASN233 4.9 24.5 1.0
CB A:ASN233 5.0 22.3 1.0
C A:SER456 5.0 21.8 1.0

Reference:

R.Fedorov, M.Bohl, G.Tsiavaliaris, F.K.Hartmann, M.H.Taft, P.Baruch, B.Brenner, R.Martin, H.J.Knolker, H.O.Gutzeit, D.J.Manstein. The Mechanism of Pentabromopseudilin Inhibition of Myosin Motor Activity. Nat.Struct.Mol.Biol. V. 16 80 2009.
ISSN: ISSN 1545-9993
PubMed: 19122661
DOI: 10.1038/NSMB.1542
Page generated: Fri Oct 11 19:21:54 2024

Last articles

Zn in 7WTZ
Zn in 7WTX
Zn in 7WTW
Zn in 7WT5
Zn in 7WTU
Zn in 7WTV
Zn in 7WTT
Zn in 7WT4
Zn in 7WT3
Zn in 7WSS
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy