Chemical elements
  Vanadium
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    PDB 1b8j-2i4e
    PDB 2jhr-6rsa
      2jhr
      2jj9
      2jlx
      2p7e
      2p8o
      2qwm
      2rar
      2rbk
      2v26
      2v6e
      2ycu
      3b5z
      3bz7
      3bz8
      3bz9
      3e81
      3f9b
      3gp5
      3gqi
      3gw8
      3i7z
      3i80
      3igc
      3mgv
      3myh
      3omx
      3p2u
      3qkq
      3rnt
      3zwu
      4dz6
      6rsa

Vanadium in the structure of Protein Tyrosine Phosphatase 1B - Transition State Analog For the First Catalytic Step (pdb 3i7z)






The binding sites of Vanadium atom in the structure of Protein Tyrosine Phosphatase 1B - Transition State Analog For the First Catalytic Step (pdb code 3i7z). This binding sites where shown with 5.0 Angstroms radius around Vanadium atom.
The 3i7z structure was solved by T.A.S.BRANDAO, S.J.JOHNSON, A.C.HENGGE, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)27.6-2.3
Space groupP3121
a (A)88.020
b (A)88.020
c (A)118.620
alpha (°)90.00
beta (°)90.00
gamma (°)120.00
Rfactor (%)20.6
Rfree (%)23.3


Vanadium Binding Sites:

Vanadium binding site 1 out of 1 in 3i7z


Vanadium binding site 1 out of 1 in 3i7z
Click to enlarge
stereopicture of Vanadium binding site 1 out of 1 in 3i7z
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Vanadium in the PDB 3i7z. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Vanadium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp181, A: Cys215, A: Ser216, A: Ala217, A: Gly218, A: Ile219, A: Gly220, A: Arg221, B: Tyr992, A: Vo4322, A: Hoh465,

conact list:


AtomAtomDistance (A)
VOD2 A:Asp1814.93
VOD1 A:Asp1813.81
VCG A:Asp1814.65
VCB A:Cys2153.52
VSG A:Cys2152.47
VC A:Cys2154.75
VCA A:Cys2154.69
VN A:Ser2164.05
VCB A:Ser2164.96
VC A:Ser2164.83
VCA A:Ser2164.81
VN A:Ala2173.86
VC A:Ala2174.72
VCB A:Ala2174.27
VCA A:Ala2174.48
VN A:Gly2184.08
VCA A:Gly2184.95
VN A:Ile2194.38
VC A:Ile2194.88
VCG1 A:Ile2194.79
VN A:Gly2203.79
VC A:Gly2204.68
VCA A:Gly2204.17
VN A:Arg2214.05
VCB A:Arg2214.93
VCZ A:Arg2214.41
VCG A:Arg2214.93
VNE A:Arg2213.93
VNH2 A:Arg2213.92
VCE2 B:Tyr9924.13
VCZ B:Tyr9923.15
VCE1 B:Tyr9923.82
VOH B:Tyr9922.12
VO1 A:Vo43221.91
VO2 A:Vo43221.88
VO3 A:Vo43221.89
VV A:Vo43220.00
VO A:Hoh4653.72

interactive model:




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