Vanadium in the structure of Crystal Structure of Msba From Salmonella Typhimurium With Adp Vanadate (pdb 3b5z)

The binding sites of Vanadium atom in the structure of Crystal Structure of Msba From Salmonella Typhimurium With Adp Vanadate (pdb code 3b5z). This binding sites where shown with 5.0 Angstroms radius around Vanadium atom. The 3b5z structure was solved by A.WARD, C.L.REYES, J.YU, C.B.ROTH, G.CHANG, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 20.0-4.2 Space group C121 a (A) 267.169 b (A) 121.103 c (A) 176.744 alpha (°) 90.00 beta (°) 121.57 gamma (°) 90.00 Rfactor (%) 33.6 Rfree (%) 36.2 Vanadium Binding Sites: Vanadium binding site 1 out of 4 in 3b5z Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Vanadium in the PDB 3b5z. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Vanadium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Ser378, A: Lys382, A: Ser383, A: Adp5001, A: I425005, conact list: Atom Atom Distance (A) V CA A:Ser378 4.46 V CA A:Lys382 4.94 V CA A:Ser383 4.13 V O1B A:Adp5001 3.29 V PB A:Adp5001 2.44 V O2B A:Adp5001 3.40 V O3A A:Adp5001 3.69 V V A:I425005 0.00 V OV1 A:I425005 1.44 interactive model: Vanadium binding site 2 out of 4 in 3b5z Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Vanadium in the PDB 3b5z. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Vanadium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Ser378, B: Lys382, B: Ser383, B: Adp5002, B: I425006, conact list: Atom Atom Distance (A) V CA B:Ser378 4.39 V CA B:Lys382 4.86 V CA B:Ser383 4.20 V O1B B:Adp5002 3.43 V PB B:Adp5002 2.59 V O2B B:Adp5002 3.59 V O3A B:Adp5002 3.74 V V B:I425006 0.00 V OV1 B:I425006 1.47 interactive model: Vanadium binding site 3 out of 4 in 3b5z Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Vanadium in the PDB 3b5z. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Vanadium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: Ser378, C: Lys382, C: Ser383, C: Adp5003, C: I425007, conact list: Atom Atom Distance (A) V CA C:Ser378 4.44 V CA C:Lys382 4.48 V CA C:Ser383 3.96 V O1B C:Adp5003 3.30 V PB C:Adp5003 2.47 V O2B C:Adp5003 3.48 V O3A C:Adp5003 3.60 V V C:I425007 0.00 V OV1 C:I425007 1.42 interactive model: Vanadium binding site 4 out of 4 in 3b5z Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Vanadium in the PDB 3b5z. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Vanadium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: D: Ser378, D: Lys382, D: Ser383, D: Adp5004, D: I425008, conact list: Atom Atom Distance (A) V CA D:Ser378 4.55 V CA D:Lys382 4.93 V CA D:Ser383 4.07 V O1B D:Adp5004 3.32 V PB D:Adp5004 2.47 V O2B D:Adp5004 3.44 V O3A D:Adp5004 3.66 V V D:I425008 0.00 V OV1 D:I425008 1.43 interactive model: