The binding sites of Vanadium atom in the structure of Gcatgct + Vanadium (pdb code 1qyl). This binding sites where shown with 5.0 Angstroms radius around Vanadium atom.
The 1qyl structure was solved by C.J.CARDIN, Y.GAN, J.H.THORPE, S.C.M.TEIXEIRA, B.C.GALE, M.I.A.MORAES, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
| Resolution (A) | 5.8-1.0 | | Space group | C222 | | a (A) | 22.532 | | b (A) | 58.469 | | c (A) | 24.148 | | alpha (°) | 90.00 | | beta (°) | 90.00 | | gamma (°) | 90.00 | | Rfactor (%) | 14.9 | | Rfree (%) | 18.4 |
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Vanadium binding site 1 out of 1 in 1qyl
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Click to enlarge | 
Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Vanadium in the PDB 1qyl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Vanadium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Dt4, A: Hoh102, A: Hoh103, A: Hoh108, A: Hoh124, | conact list:
| Atom | Atom | Distance (A) | | V | OP1 A:Dt4 | 4.61 | | V | OP2 A:Dt4 | 4.72 | | V | O A:Hoh102 | 4.21 | | V | O A:Hoh103 | 2.23 | | V | O A:Hoh108 | 2.10 | | V | O A:Hoh124 | 2.12 |
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