The binding sites of Vanadium atom in the structure of Crystal Structure of Scallop Myosin S1 In The Pre-Power Stroke State to 2.6 Angstrom Resolution: Flexibility and Function in the Head (pdb code 1qvi). This binding sites where shown with 5.0 Angstroms radius around Vanadium atom.
The 1qvi structure was solved by S.GOURINATH, D.M.HIMMEL, J.H.BROWN, L.RESHETNIKOVA, A.G.SZENT-GYRGYI, C.COHEN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
| Resolution (A) | 45.6-2.5 | | Space group | P1211 | | a (A) | 51.375 | | b (A) | 285.623 | | c (A) | 59.831 | | alpha (°) | 90.00 | | beta (°) | 114.50 | | gamma (°) | 90.00 | | Rfactor (%) | 21.2 | | Rfree (%) | 26.6 |
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Vanadium binding site 1 out of 1 in 1qvi
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Click to enlarge | 
Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Vanadium in the PDB 1qvi. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Vanadium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser178, A: Gly179, A: Lys182, A: Asn237, A: Ser240, A: Ser241, A: Ala462, A: Gly463, A: Mg1997, A: Vo41998, A: Adp1999, A: Hoh2020, | conact list:
| Atom | Atom | Distance (A) | | V | N A:Ser178 | 4.89 | | V | CB A:Ser178 | 4.06 | | V | OG A:Ser178 | 3.56 | | V | C A:Ser178 | 4.20 | | V | CA A:Ser178 | 3.73 | | V | N A:Gly179 | 3.64 | | V | CA A:Gly179 | 4.72 | | V | CE A:Lys182 | 4.66 | | V | NZ A:Lys182 | 3.94 | | V | CB A:Asn237 | 4.91 | | V | ND2 A:Asn237 | 4.08 | | V | CG A:Asn237 | 4.99 | | V | CB A:Ser240 | 4.63 | | V | OG A:Ser240 | 3.96 | | V | C A:Ser240 | 4.95 | | V | CA A:Ser240 | 4.56 | | V | O A:Ser241 | 4.53 | | V | N A:Ser241 | 4.23 | | V | CB A:Ser241 | 4.86 | | V | C A:Ala462 | 4.94 | | V | CA A:Ala462 | 4.90 | | V | N A:Gly463 | 4.01 | | V | CA A:Gly463 | 4.66 | | V | MG A:Mg1997 | 3.99 | | V | O1 A:Vo41998 | 1.76 | | V | O2 A:Vo41998 | 1.60 | | V | O4 A:Vo41998 | 1.94 | | V | O3 A:Vo41998 | 1.68 | | V | V A:Vo41998 | 0.00 | | V | O3B A:Adp1999 | 2.25 | | V | O1B A:Adp1999 | 4.10 | | V | PB A:Adp1999 | 3.27 | | V | O2B A:Adp1999 | 4.23 | | V | O3A A:Adp1999 | 4.41 | | V | O A:Hoh2020 | 4.13 |
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